There are some common questions about developing, debugging and testing been asked again and again. In order to help the developers to contribute to Gluten as soon as possible, we collected these frequently asked questions, and organized them in the form of Q&A. It’s convenient for the developers to check and learn.
when you encountered a new problem and then resolved it, please add a new item to this document if you think it may be helpful to the other developers.
We use gluten_home
to represent the home directory of Gluten in this document.
How to understand the key work of Gluten?
The Gluten worked as the role of bridge, it’s a middle layer between the Spark and the native execution library.
The Gluten is responsibility for validating whether the operators of the Spark plan can be executed by the native engine or not. If yes, the Gluten transforms Spark plan to Substrait plan, and then send the Substrait plan to the native engine.
The Gluten codes consist of two parts: the C++ codes and the Java/Scala codes.
- All C++ codes are placed under the directory of
gluten_home/cpp
, the Java/Scala codes are placed under several directories, such asgluten_home/gluten-core
gluten_home/gluten-data
gluten_home/backends-velox
. - The Java/Scala codes are responsibility for validating and transforming the execution plan. Source data should also be provided, the source data may come from files or other forms such as networks.
- The C++ codes take the Substrait plan and the source data as inputs and transform the Substrait plan to the corresponding backend plan. If the backend is Velox, the Substrait plan will be transformed to the Velox plan, and then be executed.
JNI is a programming technology of invoking C++ from Java. All JNI interfaces are defined in the file JniWrapper.cc
under the directory jni
.
How to debug in Gluten?
1 How to debug C++
If you don’t concern about the Scala/Java codes and just want to debug the C++ codes executed in native engine, you may debug the C++ via benchmarks with GDB.
To debug C++, you have to generate the example files, the example files consist of:
- A file contained Substrait plan in JSON format
- One or more input data files in Parquet format
You can generate the example files by the following steps:
- build Velox and Gluten CPP
gluten_home/dev/builddeps-veloxbe.sh --build_tests=ON --build_benchmarks=ON --build_type=Debug
- Compiling with
--build_type=Debug
is good for debugging. - The executable file
generic_benchmark
will be generated under the directory ofgluten_home/cpp/build/velox/benchmarks/
.
- Compiling with
- build Gluten and generate the example files
cd gluten_home mvn clean package -Pspark-3.2 -Pbackends-velox -Prss mvn test -Pspark-3.2 -Pbackends-velox -Prss -pl backends-velox -am -DtagsToInclude="io.glutenproject.tags.GenerateExample" -Dtest=none -DfailIfNoTests=false -Darrow.version=11.0.0-gluten -Dexec.skip
- After the above operations, the examples files are generated under
gluten_home/backends-velox
- You can check it by the command
tree gluten_home/backends-velox/generated-native-benchmark/
- You may replace
-Pspark-3.2
with-Pspark-3.3
if your spark’s version is 3.3$ tree gluten_home/backends-velox/generated-native-benchmark/ gluten_home/backends-velox/generated-native-benchmark/ ├── example.json ├── example_lineitem │ ├── part-00000-3ec19189-d20e-4240-85ae-88631d46b612-c000.snappy.parquet │ └── _SUCCESS └── example_orders ├── part-00000-1e66fb98-4dd6-47a6-8679-8625dbc437ee-c000.snappy.parquet └── _SUCCESS
- After the above operations, the examples files are generated under
- now, run benchmarks with GDB
cd gluten_home/cpp/build/velox/benchmarks/ gdb generic_benchmark
- When GDB load
generic_benchmark
successfully, you can setbreakpoint
on themain
function with commandb main
, and then run with commandr
, then the processgeneric_benchmark
will start and stop at themain
function. - You can check the variables’ state with command
p variable_name
, or execute the program line by line with commandn
, or step-in the function been called with commands
. - Actually, you can debug
generic_benchmark
with any gdb commands as debugging normal C++ program, because thegeneric_benchmark
is a pure C++ executable file in fact.
- When GDB load
-
gdb-tui
is a valuable feature and is worth trying. You can get more help from the online docs. gdb-tui - you can start
generic_benchmark
with specific JSON plan and input files- If you omit them, the
example.json, example_lineitem + example_orders
under the directory ofgluten_home/backends-velox/generated-native-benchmark
will be used as default. - You can also edit the file
example.json
to custom the Substrait plan or specify the inputs files placed in the other directory.
- If you omit them, the
- get more detail information about benchmarks from MicroBenchmarks
2 How to debug plan validation process
Gluten will validate generated plan before execute it, and validation usually happens in native side, so we provide a utility to help debug validation process in native side.
- Run query with conf
spark.gluten.sql.debug=true
, and you will find generated plan be printed in stderr with json format, save it asplan.json
for example. - Compile cpp part with
--build_benchmarks=ON
, then checkplan_validator_util
executable file ingluten_home/cpp/build/velox/benchmarks/
. - Run or debug with
./plan_validator_util <path>/plan.json
3 How to debug Java/Scala
wait to add
4 How to debug with core-dump
wait to complete
cd the_directory_of_core_file_generated
gdb gluten_home/cpp/build/releases/libgluten.so 'core-Executor task l-2000883-1671542526'
- the
core-Executor task l-2000883-1671542526
represents the core file name.
How to run TPC-H on Velox backend
Now, both Parquet and DWRF format files are supported, related scripts and files are under the directory of gluten_home/backends-velox/workload/tpch
. The file README.md
under gluten_home/backends-velox/workload/tpch
offers some useful help but it’s still not enough and exact.
One way of run TPC-H test is to run velox with docker by workflow, you can refer to velox_docker.yml
Here will explain how to run TPC-H on Velox backend with the Parquet file format.
- First step, prepare the datasets, you have two choices.
- One way, generate Parquet datasets using the script under
gluten_home/backends-velox/workload/tpch/gen_data/parquet_dataset
, You can get help from the above mentionedREADME.md
. - The other way, using the small dataset under
gluten_home/backends-velox/src/test/resources/tpch-data-parquet-velox
directly, If you just want to make simple TPC-H testing, this dataset is a good choice.
- One way, generate Parquet datasets using the script under
- Second step, run TPC-H on Velox backend testing.
- Modify
gluten_home/backends-velox/workload/tpch/run_tpch/tpch_parquet.scala
.
- set
var parquet_file_path
to correct directory. If using the small dataset directly in the step one, then modify it as belowvar parquet_file_path = "gluten_home/backends-velox/src/test/resources/tpch-data-parquet-velox"
- set
var gluten_root
to correct directory. Ifgluten_home
is the directory of/home/gluten
, then modify it as belowvar gluten_root = "/home/gluten"
- Modify `gluten_home/backends-velox/workload/tpch/run_tpch/tpch_parquet.sh`.
- Set
GLUTEN_JAR
correctly. Please refer to the section of Build Gluten with Velox Backend - Set
SPARK_HOME
correctly. - Set the memory configurations appropriately. - Execute
tpch_parquet.sh
using the below command. cd gluten_home/backends-velox/workload/tpch/run_tpch/
./tpch_parquet.sh
- Modify
How to run TPC-DS
wait to add
How to track the memory exhaust problem
When your gluten spark jobs failed because of OOM, you can track the memory allocation’s call stack by configuring spark.gluten.backtrace.allocation = true
. The above configuration will use BacktraceAllocationListener
wrapping from SparkAllocationListener
to create VeloxMemoryManager
.
BacktraceAllocationListener
will check every allocation, if a single allocation bytes exceeds a fixed value or the accumulative allocation bytes exceeds 1/2/3…G, the call stack of memory allocation will be outputted to standard output, you can check the backtrace and get some valuable information about tracking the memory exhaust issues.
You can also adjust the policy to decide when to backtrace, such as the fixed value.